BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B01LP1|AL428839
(890 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1384 1733 0.0
3x_Contig1722 230 4e-60
3x_Contig1787 153 7e-37
3x_Contig1716 153 7e-37
3x_Contig1325 147 4e-35
3x_Contig1023 147 4e-35
3x_Contig695 147 4e-35
3x_Contig1329 145 2e-34
>3x_Contig1384
Length = 9372
Score = 1733 bits (874), Expect = 0.0
Identities = 886/890 (99%)
Strand = Plus / Minus
Query: 1 cccagtgataacatgtttttgctgtattagattgatcaaccgtttatcgccatcgctatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 cccagtgataacatgtttttgctgtattagattgatcaaccgtttatcgccatcgctatc 968
Query: 61 cacaaacactttcaaagaagataagtcgcatagtttcgagtcgaataatgagtaacagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 cacaaacactttcaaagaagataagtcgcatagtttcgagtcgaataatgagtaacagcc 908
Query: 121 gcataccaaaattatcactaaatccccttttgagcttacgtttttaatttcatgtataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 gcataccaaaattatcactaaatccccttttgagcttacgtttttaatttcatgtataat 848
Query: 181 actttcgaaatcgtaatctttgtctgaatactgtctcggtgcgatggcacgttcatcgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 actttcgaaatcgtaatctttgtctgaatactgtctcggtgcgatggcacgttcatcgag 788
Query: 241 atcaattactctaacatcatgcttgaatattcccagtagtttggattcgatttctttggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 atcaattactctaacatcatgcttgaatattcccagtagtttggattcgatttctttggt 728
Query: 301 ggtttgcaaagcaccagcataatgaccgccagcaatgttgataactatacgatgcaacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ggtttgcaaagcaccagcataatgaccgccagcaatgttgataactatacgatgcaacat 668
Query: 361 tactttgccttaactaatgatcaaaacagtatttgaaagacctgctgttcgccgtgtttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tactttgccttaactaatgatcaaaacagtatttgaaagacctgctgttcgccgtgtttg 608
Query: 421 tattcaacagttgtctccctggtcgtctaaaagtgcatatttttcttttatgacttaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tattcaacagttgtctccctggtcgtctaaaagtgcatatttttcttttatgacttaatt 548
Query: 481 catcaatatcccgaatgaacaatgattaggcgattactgcttgaatagtcgtgataataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 catcaatatcccgaatgaacaatgattaggcgattactgcttgaatagtcgtgataataa 488
Query: 541 atattgagggttgaaaactgtaacgcagcaatggtctaatcaaaaaatacgatctctcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 atattgagggttgaaaactgtaacgcagcaatggtctaatcaaaaaatacgatctctcat 428
Query: 601 aaaaggagctgggactcttggcatacacatagtaattttatgtactgagaaattaatgct 660
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 427 aaaaggagctgggactcttggcatacacatagtaattttctgtactgagaaattaatgct 368
Query: 661 gaaatggcttttcaaaaagtcaaaaaattatggacgagtccggagtcgaaccgaagacct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gaaatggcttttcaaaaagtcaaaaaattatggacgagtccggagtcgaaccgaagacct 308
Query: 721 ctcccatgctaagggagcgcgctaccaactacgccacacgcccaattaatatgttatgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 307 ctcccatgctaagggagcgcgctaccaactacgccacacgcccaattaacatgtaatgtt 248
Query: 781 gtgatatggtttggatgatagttgattgattaatcgcctgatgagggatcgttgatatca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gtgatatggtttggatgatagttgattgattaatcgcctgatgagggatcgttgatatca 188
Query: 841 aacaatataacgaatataatataatctatttagctagatcgttgagtata 890
||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 187 aacaatataacgaatataataaaatctatttagctagatcgttgagtata 138
>3x_Contig1722
Length = 17718
Score = 230 bits (116), Expect = 4e-60
Identities = 119/120 (99%)
Strand = Plus / Plus
Query: 771 atgttatgttgtgatatggtttggatgatagttgattgattaatcgcctgatgagggatc 830
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1730 atgttctgttgtgatatggtttggatgatagttgattgattaatcgcctgatgagggatc 1789
Query: 831 gttgatatcaaacaatataacgaatataatataatctatttagctagatcgttgagtata 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1790 gttgatatcaaacaatataacgaatataatataatctatttagctagatcgttgagtata 1849
>3x_Contig1787
Length = 34189
Score = 153 bits (77), Expect = 7e-37
Identities = 80/81 (98%)
Strand = Plus / Minus
Query: 683 aaaaattatggacgagtccggagtcgaaccgaagacctctcccatgctaagggagcgcgc 742
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7047 aaaaattttggacgagtccggagtcgaaccgaagacctctcccatgctaagggagcgcgc 6988
Query: 743 taccaactacgccacacgccc 763
|||||||||||||||||||||
Sbjct: 6987 taccaactacgccacacgccc 6967
>3x_Contig1716
Length = 19108
Score = 153 bits (77), Expect = 7e-37
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 690 atggacgagtccggagtcgaaccgaagacctctcccatgctaagggagcgcgctaccaac 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1188 atggacgagtccggagtcgaaccgaagacctctcccatgctaagggagcgcgctaccaac 1247
Query: 750 tacgccacacgcccaat 766
|||||||||||||||||
Sbjct: 1248 tacgccacacgcccaat 1264
>3x_Contig1325
Length = 7053
Score = 147 bits (74), Expect = 4e-35
Identities = 74/74 (100%)
Strand = Plus / Minus
Query: 690 atggacgagtccggagtcgaaccgaagacctctcccatgctaagggagcgcgctaccaac 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6039 atggacgagtccggagtcgaaccgaagacctctcccatgctaagggagcgcgctaccaac 5980
Query: 750 tacgccacacgccc 763
||||||||||||||
Sbjct: 5979 tacgccacacgccc 5966
>3x_Contig1023
Length = 4339
Score = 147 bits (74), Expect = 4e-35
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 690 atggacgagtccggagtcgaaccgaagacctctcccatgctaagggagcgcgctaccaac 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2665 atggacgagtccggagtcgaaccgaagacctctcccatgctaagggagcgcgctaccaac 2724
Query: 750 tacgccacacgccc 763
||||||||||||||
Sbjct: 2725 tacgccacacgccc 2738
>3x_Contig695
Length = 2059
Score = 147 bits (74), Expect = 4e-35
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 690 atggacgagtccggagtcgaaccgaagacctctcccatgctaagggagcgcgctaccaac 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 atggacgagtccggagtcgaaccgaagacctctcccatgctaagggagcgcgctaccaac 919
Query: 750 tacgccacacgccc 763
||||||||||||||
Sbjct: 920 tacgccacacgccc 933
>3x_Contig1329
Length = 7405
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 691 tggacgagtccggagtcgaaccgaagacctctcccatgctaagggagcgcgctaccaact 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1609 tggacgagtccggagtcgaaccgaagacctctcccatgctaagggagcgcgctaccaact 1668
Query: 751 acgccacacgccc 763
|||||||||||||
Sbjct: 1669 acgccacacgccc 1681
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6895
Number of Sequences: 1807
Number of extensions: 6895
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 8
length of query: 890
length of database: 10,358,551
effective HSP length: 16
effective length of query: 874
effective length of database: 10,329,639
effective search space: 9028104486
effective search space used: 9028104486
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)